| # | Name | Elevation | Prominence | Isolation | Counties | Quadrangle |
| 1 | McLoughlin, Mount | 9,495' | 4,475' | 71.78 | Jackson | Mount McLoughlin |
| 2 | Devils Peak | 7,582' | 1,602' | 9.63 | Klamath | Devils Peak |
| 3 | Ashland, Mount | 7,532' | 3,152' | 30.53 | Jackson | Mount Ashland |
| 4 | Dutchman Peak | 7,417' | 1,557' | 9.30 | Jackson | Dutchman Peak |
| 5 | Observation Peak | 7,340' | 320' | 1.80 | Jackson | Dutchman Peak |
| 6 | Wagner Butte | 7,255' | 755' | 3.93 | Jackson | Siskiyou Peak |
| 7 | McDonald Peak | 7,220' | 600' | 1.88 | Jackson | Siskiyou Peak |
| 8 | Maude Mountain | 7,184' | 1,124' | 3.56 | Klamath | Devils Peak |
| 9 | Goose Egg | 7,124' | 744' | 1.81 | Klamath | Union Peak |
| 10 | Condrey Mountain | 7,112' | 1,830' | 7.27 | Siskiyou | Condrey Mountain |
| 11 | Big Red Mountain | 7,060' | 560' | 2.63 | Jackson | Siskiyou Peak |
| 12 | Grayback Mountain | 7,048' | 2,288' | 20.85 | Josephine | Grayback Mountain |
| 13 | Scraggy Mountain | 6,997' | 737' | 1.89 | Siskiyou | Dutch Creek |
| 14 | 6988 | 6,988' | 394' | 1.37 | Siskiyou | Condrey Mountain |
| 15 | Sherwood Butte | 6,930' | 895' | 2.61 | Douglas | Hamaker Butte |
| 16 | Tom Mountain | 6,876' | 896' | 3.14 | Klamath | Union Peak |
| 17 | Fish Mountain | 6,789' | 1,769' | 8.64 | Douglas | Fish Mountain |
| 18 | Red Butte | 6,739' | 1,599' | 9.54 | Siskiyou | Kangaroo Mountain |
| 19 | Lake Mountain | 6,687' | 787' | 2.79 | Josephine | Grayback Mountain |
| 20 | Kangaroo Mountain | 6,660' | 760' | 1.03 | Siskiyou | Kangaroo Mountain |
| 21 | Lake Peak | 6,648' | 1,468' | 6.10 | Josephine | Grayback Mountain |
| 22 | Big Bunchgrass | 6,642' | 302' | 1.01 | Klamath | Devils Peak |
| 23 | Smith Rock | 6,640' | 580' | 4.57 | Jackson | Rustler Peak |
| 24 | Donomore Peak | 6,620' | 440' | 1.76 | Jackson | Dutchman Peak |
| 25 | 6601 | 6,601' | 381' | 2.88 | Klamath | Mount McLoughlin |
| 26 | Whisky Peak | 6,489' | 1,149' | 2.10 | Josephine | Grayback Mountain |
| 27 | White Mountain | 6,460' | 520' | 2.79 | Siskiyou | Dutch Creek |
| 28 | Pyramid Peak | 6,451' | 1,031' | 3.08 | Siskiyou | Figurehead Mountain |
| 29 | Rocktop Butte | 6,426' | 606' | 3.28 | Jackson | Red Blanket Mountain |
| 30 | 6420 | 6,420' | 480' | 0.93 | Josephine | Grayback Mountain |
| 31 | Black Mountain | 6,380' | 320' | 0.41 | Siskiyou | Dutch Creek |
| 32 | 6378 | 6,378' | 918' | 2.77 | Siskiyou | Figurehead Mountain |
| 33 | 6377 | 6,377' | 357' | 1.56 | Jackson | Red Blanket Mountain |
| 34 | Weaver Mountain | 6,371' | 951' | 1.66 | Douglas | Fish Mountain |
| 35 | Craggy Mountain | 6,359' | 819' | 2.62 | Josephine | Grayback Mountain |
| 36 | 6355 | 6,355' | 495' | 0.72 | Josephine | Grayback Mountain |
| 37 | Red Blanket Mountain | 6,352' | 412' | 2.25 | Jackson | Red Blanket Mountain |
| 38 | Old Baldy | 6,339' | 1,009' | 6.04 | Jackson | Little Chinquapin Mountain |
| 39 | Little Craggy Peak | 6,315' | 335' | 0.68 | Josephine | Grayback Mountain |
| 40 | Rattlesnake Mountain | 6,307' | 647' | 2.07 | Siskiyou | Kangaroo Mountain |
| 41 | Hershberger Mountain | 6,285' | 545' | 1.78 | Douglas | Fish Mountain |
| 42 | Swan Mountain | 6,272' | 652' | 1.57 | Josephine | Grayback Mountain |
| 43 | Cook and Green Butte | 6,260' | 400' | 1.21 | Siskiyou | Kangaroo Mountain |
| 44 | Jackass Mountain | 6,230' | 490' | 0.92 | Douglas | Fish Mountain |
| 45 | 6223 | 6,223' | 323' | 2.32 | Jackson | Siskiyou Peak |
| 46 | Rustler Peak | 6,208' | 1,188' | 6.20 | Jackson | Rustler Peak |
| 47 | Brush Mountain | 6,170' | 460' | 1.63 | Jackson | Brown Mountain |
| 48 | Buckneck Mountain | 6,143' | 763' | 2.54 | Douglas | Hamaker Butte |
| 49 | Desolation Peak | 6,140' | 400' | 1.03 | Siskiyou | Kangaroo Mountain |
| 50 | 6119 | 6,119' | 379' | 1.48 | Josephine | Grayback Mountain |
| 51 | Emily, Mount | 6,100' | 560' | 1.80 | Siskiyou | Figurehead Mountain |
| 52 | 6045 | 6,045' | 545' | 1.14 | Douglas | Fish Mountain |
| 53 | Rabbit Ears, West | 6,020' | 560' | 1.94 | Douglas | Fish Mountain |
| 54 | Bessie Rock | 5,953' | 853' | 3.08 | Jackson | Red Blanket Mountain |
| 55 | 5940 | 5,940' | 440' | 0.54 | Douglas | Fish Mountain |
| 56 | Fruit Mountain | 5,932' | 352' | 1.72 | Siskiyou | Kangaroo Mountain |
| 57 | 5900 | 5,900' | 320' | 0.64 | Siskiyou | Kangaroo Mountain |
| 58 | 5882 | 5,882' | 382' | 2.30 | Jackson | Mount Ashland |
| 59 | 5876 | 5,876' | 376' | 1.05 | Siskiyou | Figurehead Mountain |
| 60 | Robinson Butte | 5,864' | 1,154' | 5.69 | Jackson | Robinson Butte |
| 61 | Lilly Mountain | 5,860' | 960' | 3.20 | Siskiyou | Dutchman Peak |
| 62 | Steve Peak | 5,835' | 1,055' | 2.78 | Josephine | Grayback Mountain |
| 63 | Whaleback | 5,820' | 720' | 3.49 | Jackson | Abbott Butte |
| 64 | Falcon Butte | 5,752' | 532' | 1.64 | Douglas | Abbott Butte |
| 65 | Quartz Mountain | 5,657' | 357' | 1.74 | Jackson | Abbott Butte |
| 66 | Goff Butte | 5,593' | 373' | 1.40 | Siskiyou | Figurehead Mountain |
| 67 | 5588 | 5,588' | 608' | 4.11 | Douglas | Butler Butte |
| 68 | Cox Butte | 5,370' | 380' | 4.11 | Jackson | Brown Mountain |
| 69 | Bald Mountain | 5,300' | 1,155' | 7.81 | Jackson | Whetstone Point |
| 70 | Acorn Woman Mountain | 5,300' | 400' | 4.10 | Jackson | Dutchman Peak |
| 71 | Stricklin Butte | 5,211' | 391' | 3.65 | Siskiyou | Carberry Creek |
| 72 | Round Top | 5,203' | 596' | 3.86 | Jackson | Whetstone Point |
| 73 | Minnehaha Ridge | 5,202' | 382' | 2.72 | Douglas | Hamaker Butte |
| 74 | 5123 | 5,123' | 343' | 1.52 | Douglas | Union Creek |
| 75 | 5114 | 5,114' | 384' | 4.11 | Jackson | Robinson Butte |
| 76 | Little Grayback Mountain | 5,083' | 783' | 4.60 | Jackson | Squaw Lakes |
| 77 | Humpy Mountain | 5,060' | 1,880' | 4.32 | Jackson | Tallowbox Mountain |
| 78 | Acorn Woman Peak | 4,994' | 334' | 2.24 | Jackson | Squaw Lakes |
| 79 | Winburn Ridge | 4,980' | 480' | 2.54 | Jackson | Ashland |
| 80 | Windy Peak | 4,934' | 474' | 2.86 | Siskiyou | Kangaroo Mountain |
| 81 | 4781 | 4,781' | 401' | 1.62 | Jackson | Carberry Creek |
| 82 | Burnt Peak | 4,781' | 481' | 2.44 | Jackson | Carberry Creek |
| 83 | Hawk Mountain | 4,780' | 600' | 2.59 | Douglas | Ragsdale Butte |
| 84 | 4740 | 4,740' | 440' | 2.91 | Jackson | Robinson Butte |
| 85 | Stella, Mount | 4,715' | 748' | 3.04 | Jackson | Union Creek |
| 86 | Baldy Peak | 4,660' | 720' | 2.23 | Jackson | Squaw Lakes |
| 87 | Elkhorn Peak | 4,660' | 600' | 1.60 | Douglas | Sugarpine Creek |
| 88 | 4540 | 4,540' | 440' | 3.75 | Jackson | Squaw Lakes |
| 89 | Kinney Mountain | 4,518' | 1,018' | 2.55 | Jackson | Carberry Creek |
| 90 | 4504 | 4,504' | 324' | 2.37 | Jackson | Union Creek |
| 91 | 4500 | 4,500' | 400' | 1.41 | Jackson | Dutchman Peak |
| 92 | 4420 | 4,420' | 320' | 2.13 | Jackson | Dutchman Peak |
| 93 | Abney Butte | 4,403' | 573' | 1.12 | Siskiyou | Kangaroo Mountain |
| 94 | Stein Butte | 4,398' | 338' | 1.06 | Jackson | Squaw Lakes |
| 95 | 4386 | 4,386' | 446' | 1.98 | Josephine | Grayback Mountain |
| 96 | 4380 | 4,380' | 320' | 3.20 | Jackson | Prospect South |
| 97 | 4380 | 4,380' | 348' | 1.69 | Jackson | Abbott Butte |
| 98 | Steamboat Mountain | 4,151' | 648' | 2.02 | Jackson | Carberry Creek |
| 99 | 3862 | 3,862' | 402' | 2.00 | Jackson | Ashland |
| 100 | Hells Island | 3,820' | 320' | 1.87 | Jackson | Sugarpine Creek |
| 101 | 3722 | 3,722' | 502' | 1.30 | Jackson | Squaw Lakes |
| 102 | Collings Mountain | 3,625' | 565' | 2.24 | Jackson | Carberry Creek |
| 103 | 3420 | 3,420' | 320' | 1.12 | Josephine | Carberry Creek |