| # | Name | Rank | Elevation | Prominence | Counties | Quadrangle |
| 1 | Black Elk Peak | 1 | 7,242' | 2,932' | Pennington | Custer |
| 2 | Odakota Mountain | 2 | 7,199' | 1,327' | Pennington | Ditch Creek |
| 3 | Bear Mountain | 3 | 7,168' | 457' | Pennington | Berne |
| 4 | Terry Peak | 5 | 7,070' | 1,012' | Lawrence | Lead |
| 5 | "Sylvan Peak" | 6 | 7,001' | 769' | Custer | Custer |
| 6 | Little Devils Tower | 7 | 6,982' | 428' | Custer | Custer |
| 7 | White Tail Peak | 8 | 6,971' | 373' | Pennington | Deerfield |
| 8 | 6959 | 9 | 6,959' | 308' | Pennington | Deerfield |
| 9 | Medicine Mountain | 11 | 6,878' | 338' | Pennington | Medicine Mountain |
| 10 | 6850 | 12 | 6,850' | 348' | Pennington | Deerfield |
| 11 | Custer Peak | 14 | 6,804' | 654' | Lawrence | Minnesota Ridge |
| 12 | Hat Mountain | 15 | 6,779' | 369' | Pennington | Ditch Creek |
| 13 | 6750 | 16 | 6,750' | 320' | Custer | Signal Hill |
| 14 | Atlantic Hill | 26 | 6,393' | 373' | Custer | Berne |
| 15 | 6361 | 29 | 6,361' | 421' | Custer | Berne |
| 16 | 6260 | 33 | 6,260' | 800' | Custer | Cicero Peak |
| 17 | Cicero Peak | 43 | 6,166' | 503' | Custer | Cicero Peak |
| 18 | Custer Mountain | 46 | 6,100' | 600' | Custer | Custer |
| 19 | 6060 | 48 | 6,060' | 400' | Custer | Cicero Peak |
| 20 | Coolidge, Mount | 54 | 6,023' | 683' | Custer | Mount Coolidge |
| 21 | 5948 | 58 | 5,948' | 568' | Custer | Cicero Peak |
| 22 | Scruton Mountain | 60 | 5,922' | 342' | Pennington | Silver City |
| 23 | 5900 | 61 | 5,900' | 560' | Custer | Iron Mountain |
| 24 | 5834 | 73 | 5,834' | 334' | Custer | Cicero Peak |
| 25 | Theodore Roosevelt, Mount | 89 | 5,700' | 360' | Lawrence | Spearfish |
| 26 | 5688 | 92 | 5,688' | 388' | Custer | Iron Mountain |
| 27 | 5604 | 100 | 5,604' | 384' | Custer | Cicero Peak |