| # | Name | Rank | Elevation | Prominence | Counties | Quadrangle |
| 1 | Twin Peaks, South | 11065 | 921' | 335' | San Francisco | San Francisco North |
| 2 | Twin Peaks, North | 914' | 73' | San Francisco | San Francisco North | |
| 3 | Fletcher Hills | 830' | 60' | San Diego | El Cajon | |
| 4 | Soledad Mountain | 11151 | 822' | 472' | San Diego | La Jolla OEW |
| 5 | Battle Mountain | 11175 | 803' | 333' | San Diego | Escondido |
| 6 | La Jolla Mesa | 590' | 20' | San Diego | La Jolla OEW | |
| 7 | Bernal Heights | 487' | 275' | San Francisco | San Francisco South | |
| 8 | Point Loma | 11316 | 430' | 415' | San Diego | Point Loma |
| 9 | Bodega Head | 265' | 205' | Sonoma | Bodega Head |