| # | Name | Rank | Elevation | Prominence | Counties | Quadrangle |
| 1 | Fitch Mountain | 10999 | 991' | 781' | Sonoma | Healdsburg |
| 2 | 991 | S | 991' | 291' | Contra Costa | Diablo |
| 3 | 980 | 11017 | 980' | 361' | Santa Cruz | Laurel |
| 4 | Wolf Ridge | 11018 | 980' | 360' | Marin | Point Bonita |
| 5 | 950 | 11038 | 950' | 460' | Monterey | Spreckels |
| 6 | "Garin Peak" | 948' | 198' | Alameda | Hayward | |
| 7 | "Hunters Point" | 945' | 125' | Santa Clara | Cupertino | |
| 8 | 940 | 11047 | 940' | 440' | Santa Cruz | Felton |
| 9 | 940 | 11049 | 940' | 400' | San Mateo | Woodside |
| 10 | Sherburne Hills | 11050 | 940' | 320' | Contra Costa | Diablo |
| 11 | Slacker Hill | 937' | 274' | Marin | San Francisco North | |
| 12 | "Vista Peak" | 934' | 4' | Alameda | Hayward | |
| 13 | Davidson, Mount | 11053 | 932' | 629' | San Francisco | San Francisco South |
| 14 | Twin Peaks, South | 11065 | 921' | 335' | San Francisco | San Francisco North |
| 15 | Hawk Hill | 11071 | 912' | 325' | Marin | San Francisco North |
| 16 | Cerro Cabrillo | 11072 | 911' | 611' | San Luis Obispo | Morro Bay South |
| 17 | Sutro, Mount | 908' | 221' | San Francisco | San Francisco North | |
| 18 | Blossom Hill | 907' | 207' | Santa Clara | Los Gatos | |
| 19 | 900 | 11085 | 900' | 360' | San Mateo | Woodside |
| 20 | 886 | 11103 | 886' | 484' | Santa Clara | Mount Madonna |
| 21 | Dougherty Hills | S | 861' | 281' | Contra Costa | Diablo |
| 22 | 860 | 11122 | 860' | 440' | Santa Clara | Mount Madonna |
| 23 | Homestead Hill | 858' | 129' | Marin | San Rafael | |
| 24 | 832 | 11143 | 832' | 462' | Contra Costa | Richmond |
| 25 | Carpenter Benchmark | 828' | 178' | Sacramento | Clarksville | |
| 26 | Little Mountain | 11154 | 820' | 560' | Marin | San Geronimo |
| 27 | 820 | S | 820' | 280' | Alameda | Niles |
| 28 | "Forest Hill" | 11168 | 812' | 325' | San Francisco | San Francisco South |
| 29 | Chabot 2 Benchmark | 11172 | 808' | 518' | Alameda | Hayward |
| 30 | Pinole Ridge | 11173 | 807' | 417' | Contra Costa | Briones Valley |
| 31 | Battle Mountain | 11175 | 803' | 333' | San Diego | Escondido |
| 32 | Eagle Rock | 790' | 20' | Santa Clara | Calaveras Reservoir | |
| 33 | Caroline Livermore, Mount | 11182 | 781' | 781' | Marin | San Francisco North |
| 34 | Islay Hill | 11186 | 780' | 440' | San Luis Obispo | Arroyo Grande NE |
| 35 | 780 | 11187 | 780' | 365' | Santa Clara | Mount Madonna |
| 36 | "Rainbow Knoll" | 780' | 40' | Santa Clara | Cupertino | |
| 37 | "Bay Hill" | 11202 | 761' | 571' | Sonoma | Bodega Head |
| 38 | Tiburon Peninsula | 11206 | 748' | 618' | Marin | San Quentin |
| 39 | "Trench Hill" | 740' | 80' | Santa Clara | Santa Teresa Hills | |
| 40 | Pulgas Ridge | 11214 | 737' | 350' | San Mateo | San Mateo |
| 41 | Buri Buri Ridge | S | 737' | 288' | San Mateo | San Mateo |
| 42 | Valley View Benchmark | 11216 | 735' | 595' | San Luis Obispo | Pismo Beach |
| 43 | Ellen, Mount | 700' | 80' | San Mateo | La Honda | |
| 44 | Helen, Mount | 690' | 140' | Contra Costa | Briones Valley | |
| 45 | Black Hill | 11253 | 661' | 521' | San Luis Obispo | Morro Bay South |
| 46 | Wanda, Mount | 650' | 20' | Contra Costa | Briones Valley | |
| 47 | 640 | 11262 | 640' | 315' | Santa Clara | Gilroy |
| 48 | 620 | 11269 | 620' | 360' | San Luis Obispo | San Luis Obispo |
| 49 | Tulare Hill | 11274 | 620' | 320' | Santa Clara | Santa Teresa Hills |
| 50 | Point Reyes | 11276 | 612' | 562' | Marin | Drakes Bay OESW |
| 51 | "Tank Hill" | 612' | 25' | San Francisco | San Francisco North | |
| 52 | Ring Mountain | 11282 | 602' | 413' | Marin | San Quentin |
| 53 | Montgomery Hill | 590' | 60' | Santa Clara | San Jose East | |
| 54 | Alum Rock | 590' | 20' | Santa Clara | Calaveras Reservoir | |
| 55 | Sugarloaf Hill | 586' | 224' | San Mateo | San Mateo | |
| 56 | 580 | 11285 | 580' | 320' | San Mateo | Half Moon Bay |
| 57 | Morro Rock | 11287 | 578' | 558' | San Luis Obispo | Morro Bay South |
| 58 | Buena Vista Heights | 575' | 113' | San Francisco | San Francisco North | |
| 59 | Belmont Hill | 11292 | 562' | 325' | San Mateo | San Mateo |
| 60 | Nob Hill | 540' | 165' | Santa Clara | Morgan Hill | |
| 61 | Visitacion Knob | 11298 | 537' | 300' | San Francisco | San Francisco South |
| 62 | "Corona Heights" | 510' | 123' | San Francisco | San Francisco North | |
| 63 | Bernal Heights | 487' | 275' | San Francisco | San Francisco South | |
| 64 | Oak Knoll | 470' | 15' | Alameda | Livermore | |
| 65 | 450 | S | 450' | 298' | Santa Clara | San Jose East |
| 66 | Strawberry Hill | 437' | 200' | San Francisco | San Francisco North | |
| 67 | Point Loma | 11316 | 430' | 415' | San Diego | Point Loma |
| 68 | Martinez Ridge | 415' | 165' | Contra Costa | Walnut Creek | |
| 69 | Bay View Hill | 412' | 275' | San Francisco | San Francisco South | |
| 70 | Clydes Ridge | 380' | 80' | Marin | Point Bonita | |
| 71 | Coyote Hill | 371' | 181' | Santa Clara | Palo Alto | |
| 72 | Lovers Leap | 370' | 60' | Stanislaus | Knights Ferry | |
| 73 | Belvedere Island | 11324 | 350' | 340' | Marin | San Francisco North |
| 74 | Maderia Hill | 350' | 160' | Alameda | Hayward | |
| 75 | Lone Hill | 340' | 85' | Santa Clara | Los Gatos | |
| 76 | Yerba Buena Island | 11326 | 338' | 338' | San Francisco | Oakland West |
| 77 | Nob Hill | 337' | 150' | San Francisco | San Francisco North | |
| 78 | Christmas Hill | 330' | 20' | Santa Clara | Chittenden | |
| 79 | Russian Hill | 312' | 25' | San Francisco | San Francisco North | |
| 80 | Whale Peak | 300' | 160' | Monterey | Soberanes Point | |
| 81 | Red Hill Top | 291' | 284' | Alameda | Newark | |
| 82 | Telegraph Hill | 287' | 200' | San Francisco | San Francisco North | |
| 83 | "Hayes Hill" | 262' | 50' | San Francisco | San Francisco North | |
| 84 | Point Happy | 220' | 130' | Riverside | La Quinta | |
| 85 | Red Hill | 188' | 18' | Alameda | Newark | |
| 86 | Turk Island | 116' | 106' | Alameda | Newark |