| # | Name | Rank | Elevation | Prominence | Counties | Quadrangle |
| 1 | Davidson, Mount | 11053 | 932' | 629' | San Francisco | San Francisco South |
| 2 | Twin Peaks, South | 11065 | 921' | 335' | San Francisco | San Francisco North |
| 3 | 906 | 11077 | 906' | 376' | San Diego | Jamul Mountains |
| 4 | Avi Kwalal | 11097 | 890' | 605' | Imperial | Yuma West |
| 5 | Carpenter Benchmark | 828' | 178' | Sacramento | Clarksville | |
| 6 | Soledad Mountain | 11151 | 822' | 472' | San Diego | La Jolla OEW |
| 7 | Battle Mountain | 11175 | 803' | 333' | San Diego | Escondido |
| 8 | Ogilby Hills | 11181 | 788' | 368' | Imperial | Ogilby |
| 9 | Caroline Livermore, Mount | 11182 | 781' | 781' | Marin | San Francisco North |
| 10 | Cerro Benchmark | 11226 | 720' | 300' | San Diego | Borrego Mountain SE |
| 11 | Helen, Mount | 690' | 140' | Contra Costa | Briones Valley | |
| 12 | Shore Line Butte | 11252 | 662' | 482' | Inyo | Shore Line Butte |
| 13 | Buena Vista Heights | 575' | 113' | San Francisco | San Francisco North | |
| 14 | Olympus, Mount | 562' | 100' | San Francisco | San Francisco North | |
| 15 | Cerro de la Calavera | 513' | 183' | San Diego | San Luis Rey | |
| 16 | North Algodones Dunes Wilderness HP | 510' | 120' | Imperial | Acolita | |
| 17 | Bernal Heights | 487' | 275' | San Francisco | San Francisco South | |
| 18 | Point Loma | 11316 | 430' | 415' | San Diego | Point Loma |
| 19 | Bay View Hill | 412' | 275' | San Francisco | San Francisco South |