| # | Name | Rank | Elevation | Prominence | Counties | Quadrangle |
| 1 | 1981 | 9326 | 1,981' | 556' | Riverside | Lakeview |
| 2 | Clarks Peak | 9363 | 1,965' | 528' | Ventura | Triunfo Pass |
| 3 | 1953 | 9377 | 1,953' | 643' | San Diego | Jamul Mountains |
| 4 | 1953 | 9378 | 1,953' | 413' | San Diego | Otay Mountain |
| 5 | Sugarloaf Mountain | 9395 | 1,944' | 414' | Riverside | Riverside East |
| 6 | 1930 | 9443 | 1,930' | 300' | Riverside | Perris |
| 7 | 1913 | 9469 | 1,913' | 623' | San Bernardino | Fontana |
| 8 | Dehesa Benchmark | 9487 | 1,904' | 484' | San Diego | Alpine |
| 9 | Shandin Hills | 9496 | 1,900' | 438' | San Bernardino | San Bernardino North |
| 10 | 1890 | 9525 | 1,890' | 350' | Riverside | El Casco |
| 11 | 1860 | 9574 | 1,860' | 400' | San Diego | San Vicente Reservoir |
| 12 | Arlington Mountain | 9586 | 1,853' | 473' | Riverside | Lake Mathews |
| 13 | 1827 | 9640 | 1,827' | 447' | El Dorado | Coloma |
| 14 | 1783 | 9735 | 1,783' | 363' | San Diego | Alpine |
| 15 | San Juan Hill | 9736 | 1,781' | 976' | Orange & San Bernardino | Prado Dam |
| 16 | 1768 | 9778 | 1,768' | 658' | Riverside | Fontana |
| 17 | 1739 | 9844 | 1,739' | 689' | Riverside | Fontana |
| 18 | Whitney, Mount | 9846 | 1,736' | 1,046' | San Diego | Rancho Santa Fe |
| 19 | 1686 | 9936 | 1,686' | 368' | San Bernardino | Prado Dam |
| 20 | Gilman Peak | 1,685' | 195' | Orange | Yorba Linda | |
| 21 | Double Peak | 10011 | 1,644' | 474' | San Diego | Rancho Santa Fe |
| 22 | Rattlesnake Mountain | 10083 | 1,602' | 392' | Riverside | Fontana |
| 23 | Black Mountain | 10165 | 1,552' | 922' | San Diego | Poway |
| 24 | Mother Miguel Mountain | 10231 | 1,527' | 457' | San Diego | Jamul Mountains |
| 25 | 1525 | 10236 | 1,525' | 475' | San Diego | Jamul Mountains |
| 26 | 1510 | 10263 | 1,510' | 745' | Riverside | Corona North |
| 27 | 1510 | 10266 | 1,510' | 300' | San Bernardino | Yorba Linda |
| 28 | Linn Benchmark | 10299 | 1,495' | 405' | Riverside | Corona North |
| 29 | 1470 | 10350 | 1,470' | 360' | Orange | Yorba Linda |
| 30 | Pomona Benchmark | 10352 | 1,470' | 340' | Los Angeles | San Dimas |
| 31 | 1452 | 10392 | 1,452' | 302' | Riverside | Fontana |
| 32 | 1430 | 10415 | 1,430' | 368' | Riverside | Corona North |
| 33 | Pedley Hills | 10422 | 1,424' | 514' | Riverside | Riverside West |
| 34 | Rubidoux, Mount | 10466 | 1,399' | 554' | Riverside | Riverside West |
| 35 | 1393 | 10471 | 1,393' | 413' | Riverside | Myoma |
| 36 | 1381 | 10486 | 1,381' | 351' | Los Angeles | San Dimas |
| 37 | Buzzard Peak | 10508 | 1,375' | 380' | Los Angeles | San Dimas |
| 38 | Helix, Mount | 10513 | 1,373' | 711' | San Diego | El Cajon |
| 39 | 1358 | 10525 | 1,358' | 338' | San Diego | Jamul Mountains |
| 40 | 1321 | 10594 | 1,321' | 341' | El Dorado | Coloma |
| 41 | Twin Peaks | 10610 | 1,306' | 496' | San Diego | Poway |
| 42 | Mugu Peak | 10664 | 1,266' | 380' | Ventura | Point Mugu |
| 43 | Black Hill | 10723 | 1,225' | 315' | Riverside | Big Maria Mountains SW |
| 44 | South Hills | 10748 | 1,212' | 342' | Los Angeles | San Dimas |
| 45 | 1190 | 10778 | 1,190' | 500' | San Diego | Escondido |
| 46 | Peralta Hills | 10781 | 1,190' | 340' | Orange | Orange |
| 47 | 1161 | 10819 | 1,161' | 371' | El Dorado | Clarksville |
| 48 | 1155 | 10825 | 1,155' | 345' | San Bernardino | Prado Dam |
| 49 | Bernardo Mountain | 10829 | 1,150' | 440' | San Diego | Escondido |
| 50 | Van Dam Peak | 10875 | 1,113' | 403' | San Diego | Poway |
| 51 | Richardson East Benchmark | 10877 | 1,111' | 931' | Marin | San Francisco North |
| 52 | Dictionary Hill | 10918 | 1,064' | 494' | San Diego | Jamul Mountains |
| 53 | "Denk Mountain" | 10937 | 1,050' | 520' | San Diego | Rancho Santa Fe |
| 54 | 1041 | 10949 | 1,041' | 341' | Marin | Point Bonita |
| 55 | Coyote Ridge | 10958 | 1,031' | 411' | Marin | Point Bonita |
| 56 | "Beacon Hill" | 10983 | 1,017' | 372' | Riverside | Corona North |